The Epitome Creator tool takes amino acid sequences (or text) as input and produces epitomes of all lengths. Learn more...

Quick Help

• Paste (CTRL-V) or upload text input text or try a sample.
• Start with Compute Results button.
• Select all results (CTRL+A) and copy (CTRL+C).
• To see all work steps, click to clear the Show Only Last check box.

More help…

References D. Yerly, D. Heckerman, T. Allen, T. Suscovich, N. Jojic, C. Kadie, W. Pichler, A. Cerny, C. Brander.  Design, expression and processing of epitomized HCV encoded CTL epitopes. J. Immunol, to appear.  D. Nickle, N. Jojic, D. Heckerman, V. Jojic, D. Kirovski, M. Rolland, S. Pond, J. Mullins.  Comparison of immunogen designs that optimize peptide coverage: Reply to Fischer et al., PLoS Computational Biology, 4(1):e25, January 2008.  D. Nickle, M. Rolland, M. Jensen, S. Pond, W. Deng, M. Seligman, D. Heckerman, J. Mullins, and N. Jojic.  Coping with viral diversity in HIV vaccine design, PLoS Computational Biology, 3(4): e75, April 2007.  N. Jojic, V. Jojic, B. Frey, C. Meek, and D. Heckerman.  Using epitomes to model genetic diversity: Rational design of HIV vaccine cocktails.  NIPS 2005. Code Downloadable Windows program Open source code.