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Date: 6 June 2014
Version: 2.3.6
Size: 7.14 MB
Type: Download
FaST-LMM (Factored Spectrally Transformed Linear Mixed Models) is a program for performing genome-wide association studies (GWAS) on large data sets. It runs on both Windows and Linux system, and has been tested on data sets with over 120,000 individuals.
Details
Date: 12 November 2013
Version: v2.07
Size: 12.88 MB
Type: Download
.NET Bio is an open-source library of common bioinformatics functions, intended to simplify the creation of life science applications.
Details
Date: 23 July 2013
Version: 1.1
Type: CodePlex project
This add-in for Microsoft Excel provides a simple and flexible way to work with genomic sequences, metadata, and interval data—in an Excel document. All the usual features of Excel remain available in addition to the dedicated bioinformatics features provided by the add-in. The .NET Bio Extension can also be extended by developers to use other features in the .NET Bio Framework or other custom bioinformatics capabilities.
Details
Date: 23 July 2013
Version: 1.1
Type: CodePlex project
COM components which provides scalable implementation of real-time volume rendering intended for server-based GPUs. It could also be accessed from .Net clients using the provided Runtime Callable Wrapper (RCW)
Details
Date: 15 May 2012
Version: 1.0.7
Size: 179.19 MB
Type: Download
The .NET Bio Sequence Assembler application is intended for use by biologists and laboratory technicians who manage genomic sequencing data for alignment, assembly, and/or BLAST identification. This full-featured sample application can be extended, modified, and expanded to meet the needs of scientists, researchers, and clinicians who work with genomic data.
Details
Date: 16 April 2012
Version: 1.01
Type: CodePlex project
This biological modelling tool illustrates signaling pathways and determines cellular stabilization. It enables users to draw a biological system of interest by dragging and dropping cells, their contents, extracellular components, and relationships onto a simple canvas. Bio Model Analyzer’s analysis proves stabilization of biological systems, based upon formal methods that were developed for the specification and verification of properties in concurrent software systems.
Details
Date: 1 December 2011
Version: 1
Type: Web application or service
The Microsoft Biology Foundation (MBF) 2.0 beta is a language-neutral bioinformatics tool kit built as an extension to the Microsoft .NET Framework. It implements a range of parsers for common bioinformatics file formats; a range of algorithms for manipulating DNA, RNA, and protein sequences; and a set of connectors to biological web services such as the U.S. National Center for Biotechnology Information’s Basic Local Alignment Search Tool. MBF is available under an Open Systems Interconnection...
Details
Date: 7 April 2011
Version: Beta 1
Size: 15.77 MB
Type: Download
Sho Runtime is a library that delivers advanced math and graphing capabilities on the .NET platform. The Microsoft Biology Foundation makes use of the Microsoft Research Sho Runtime Library for high-performance statistics and math capabilities.
Details
Date: 22 June 2010
Version: 1.0
Size: 31.30 MB
Type: Download
The Microsoft Biology Foundation (MBF) Sequence Assembler is a proof-of-concept-application that demonstrates the use of the Microsoft Biology Foundation, the .NET Framework, the Windows Presentation Foundation, and Microsoft Silverlight for bioinformatics research. The MBF Sequence Assembler uses rich user interface elements to enable the visualization and manipulation of genomic data.
Details
Date: 22 June 2010
Version: 1.0
Size: 3.82 MB
Type: Download
This is a Microsoft Office Excel 2007 and 2010 add-in that provides a simple, flexible way to work with genomic sequences, metadata, and interval data in an Excel workbook by exposing the features and functions of the Microsoft Biology Foundation.
Details
Date: 22 June 2010
Version: 1.0
Size: 3.54 MB
Type: Download
This tool enables biologists and modelers to construct high-level theories and models of biological systems, capturing biological hypotheses, inferred mechanisms, and experimental results within the same framework. The main components of the tool are a visual editor for constructing the model and to visualize the dynamic behavior, and an execution and analysis engine that can run the models in batch mode, interactive mode, or deterministic versus nondeterministic modes. During runtime, the execution engine...
Details
Date: 17 May 2010
Version: 1.0.0.0
Size: 0.97 MB
Type: Download
This software allows biological models to be constructed as modules that can be connected to one another without altering the modules themselves. In addition, Athena houses various tools that are useful for designing synthetic networks, including tools to perform simulations, automatically derive transcription rate expressions, and view and edit synthetic DNA sequences.
Details
Date: 25 September 2009
Version: 4
Type: CodePlex project
3D Molecule Viewer is a stand-alone, demo version of the C-ME application that InterKnowlogy built for the Scripps Research Institute. It is a Windows Presentation Foundation application built in C#. This stand-alone, source code version of the application does not have the Microsoft SharePoint dependency and allows you to open sample 3D Protein Database Format (PDB) files directly, spin them in 3D, zoom in on them, display them from different views, and more.
Details
Date: 25 November 2008
Version: 3
Type: CodePlex project
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